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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821659.1_cds_XP_016500831.1_14626
CDS Infomation

[gene=LOC107819254] [db_xref=GeneID:107819254] [protein=probable protein phosphatase 2C 72] [protein_id=XP_016500831.1] [location=join(5558..5740,5845..6153,6244..6361,6477..6700,6813..7007)] [gbkey=CDS]
Sequence

ATGGGTATCTGCATATCCAGTGAATCTTTTGAGATTCATGCTATTGATTATGGCCATGAA
AATTTGGTTCACTATGAAGACAACAACAATAACAATGGTGCCAATTGTTGCCAACAAATT
GGTTCAGTTTATACTCAACAAGGAAGCAAAGGACTCAATCAAGATTCTGCTATTCTCTAT
CAGGGATTTAGAGTGGAAAATGGAGTTTTTGGTGGAGTTTTTGACGGGCATGGAAAGAAT
GGACAGACAGTCAGCAAGTTAATTATGAATAAGTTACCATCTTTGCTTCTGAAACATATA
CTTTCTCTGCCAAAGATTACTTCTCCAAAACAAAATGTGAAAGAAGTTGATGAATCAGTG
AAGAACAAGAACTTTAACAAGTGGAAAAAGGCTTGTCTCAGCTCCTTTAAGATGGTGGAT
AAAGAAATTAAAAGTCTTGAGAAATTGGACTGTTCTTGCAGTGGAACAACTGCTGTGGTT
GTTATACGACAGGATGATGACTTGGTTATAGCTAATCTAGGCGATTCTCGAGCTTTACTA
GGAAGAAAGACAGATGAAGGAACAATAGAGGCTGTTCAGTTAACTACTGATTTAAAGCCT
AGCCTGCCTTCTGAAGCAGAAAGAATAAGGAAATGTGGTGGCAGAGTGCTAGCACTGGAA
AAAGAGGCACATATACAGAGAGTGTGGTTACCCCATGAAGATGCTCCTGGACTCGCCATG
TCCAGAGCTTTTGGAGATTTCATGCTAAAAAACTATGGTATTATCTCCAGACCTGATGTC
TCCTATCACCATCTTTCTTCCAATGATCAGTTCCTTGTTCTAGCAACTGATGGGGTATGG
GATGTGCTTAGTAATGACCAAGTCGTTTCCATAGTGTGTTCAACAAATGATGGAGCAGCA
GCCGCGAAGGCAGTGGTAGAGGCTTCAATAGATGCATGGAAGCAGAAATTTCCTAACACC
AAGAGAGATGATTGCACTGCAATCTGCCTATTCTTGCAACAACGTGCATCACTGCAGAAT
AGTACTTGA

Peptide Sequence

PEP ID

XP_016500831.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 72 [Nicotiana tabacum]
Sequence

MGICISSESFEIHAIDYGHENLVHYEDNNNNNGANCCQQIGSVYTQQGSKGLNQDSAILY
QGFRVENGVFGGVFDGHGKNGQTVSKLIMNKLPSLLLKHILSLPKITSPKQNVKEVDESV
KNKNFNKWKKACLSSFKMVDKEIKSLEKLDCSCSGTTAVVVIRQDDDLVIANLGDSRALL
GRKTDEGTIEAVQLTTDLKPSLPSEAERIRKCGGRVLALEKEAHIQRVWLPHEDAPGLAM
SRAFGDFMLKNYGIISRPDVSYHHLSSNDQFLVLATDGVWDVLSNDQVVSIVCSTNDGAA
AAKAVVEASIDAWKQKFPNTKRDDCTAICLFLQQRASLQNST

Transcript Sequence

Gene sequence data has not been registered.